STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40301.12-methylcitrate dehydratase. (488 aa)    
Predicted Functional Partners:
AMN44036.1
Carboxyvinyl-carboxyphosphonate phosphorylmutase.
 
  
 0.796
AMN40120.1
Isocitrate lyase and phosphorylmutase.
 
  
 0.790
AMN45474.1
Carboxy-phosphonoenolpyruvate mutase.
 
  
 0.781
AMN39346.1
Carboxyvinyl-carboxyphosphonate phosphorylmutase.
 
  
 0.778
AMN45305.1
2-methylisocitrate lyase.
 
  
 0.777
AMN40728.1
Isocitrate lyase and phosphorylmutase.
 
  
 0.776
AMN39823.1
2-methylisocitrate lyase.
 
  
 0.772
AMN40300.1
ABC transporter substrate-binding protein.
       0.757
AMN43925.1
Carboxyvinyl-carboxyphosphonate phosphorylmutase.
 
  
 0.749
AMN43020.1
2-methylcitrate dehydratase family protein.
  
     0.741
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.