STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40385.1Extra-cytoplasmic solute receptor family protein. (330 aa)    
Predicted Functional Partners:
AMN40386.1
Xaa-pro dipeptidyl-peptidase, peptidase family s15.
       0.686
AMN40384.1
Extra-cytoplasmic solute receptor family protein.
 
    
0.652
AMN43802.1
Tripartite tricarboxylate transporter TctB family.
 
    0.609
AMN44912.1
Tripartite tricarboxylate transporter TctB.
 
    0.604
AMN38589.1
Tripartite tricarboxylate transporter TctB family.
 
    0.599
AMN40387.1
Extra-cytoplasmic solute receptor family protein.
 
    
0.566
AMN40388.1
ABC transporter substrate-binding protein.
 
    
0.550
AMN44168.1
Tripartite tricarboxylate transporter TctB family.
 
    0.463
AMN42048.1
Tripartite tricarboxylate transporter TctB family.
 
    0.443
AMN44535.1
Tripartite tricarboxylate transporter TctB family.
 
    0.400
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.