STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40510.1Amidohydrolase. (402 aa)    
Predicted Functional Partners:
ilvE-2
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
       0.757
AMN42140.1
Fumarylacetoacetate (FAA) hydrolase.
      0.736
AMN40512.1
M24 family metallopeptidase.
       0.696
AMN44364.1
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase.
      0.672
AMN40513.1
Ornithine cyclodeaminase.
     
 0.668
AMN41034.1
Ureidoglycolate lyase.
      0.656
AMN40514.1
TRAP dicarboxylate transporter subunit DctP.
       0.654
AMN39630.1
5-carboxymethyl-2-hydroxymuconate Delta-isomerase.
      0.652
AMN39369.1
5-carboxymethyl-2-hydroxymuconate delta-isomerase.
      0.651
AMN43382.1
5-carboxymethyl-2-hydroxymuconate delta-isomerase.
      0.646
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.