STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40577.1Cupin. (113 aa)    
Predicted Functional Partners:
AMN40572.1
Extracellular ligand-binding receptor.
 
     0.837
AMN40576.1
Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
       0.760
AMN40574.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
       0.759
AMN40575.1
Sulfate-transporting ATPase.
       0.759
AMN40573.1
Amino acid ABC transporter ATP-binding protein.
       0.757
AMN40571.1
Hydantoin utilization protein B.
 
     0.725
AMN39829.1
HPr kinase.
  
     0.693
AMN40570.1
N-methylhydantoinase A.
 
     0.686
AMN40569.1
Transcriptional regulator, IclR family.
 
   
 0.646
AMN38743.1
ISSpo8, transposase.
  
     0.548
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.