STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40580.1acyl-CoA dehydrogenase. (393 aa)    
Predicted Functional Partners:
AMN41138.1
Aminoglycoside phosphotransferase.
 
 
 0.916
AMN43629.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.871
AMN39649.1
Electron transfer flavoprotein alpha subunit.
 
 0.818
AMN40581.1
P-hydroxycinnamoyl CoA hydratase/lyase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.770
AMN40579.1
acetyl-CoA synthetase.
       0.757
AMN44821.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.753
AMN39648.1
Electron transfer flavoprotein subunit beta.
 
 
 0.733
AMN39862.1
AMP-dependent synthetase and ligase.
  
 0.649
AMN39993.1
Aminoglycoside phosphotransferase.
 
 
 0.618
AMN39650.1
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.602
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.