STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40588.1Diguanylate cyclase (GGDEF) domain-containing protein. (832 aa)    
Predicted Functional Partners:
AMN45347.1
Diguanylate cyclase.
 
 
0.759
AMN43873.1
Diguanylate cyclase/phosphodiesterase.
 
 
0.758
AMN45492.1
Multi-sensor hybrid histidine kinase.
 
 
0.747
AMN45326.1
Two-component hybrid sensor and regulator.
  
 
 0.731
AMN41403.1
Signal transduction histidine kinase.
 
  
 0.706
AMN44333.1
Signal transduction histidine kinase CheA.
  
  
 0.698
AMN44765.1
Response regulator receiver modulated diguanylate phosphodiesterase.
 
  
0.661
AMN43149.1
Signal transduction histidine kinase.
    
 0.655
AMN44762.1
Sensor histidine kinase.
  
 0.638
AMN38863.1
Flp pilus assembly protein, ATPase CpaE.
   
    0.636
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.