STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40623.1Integral membrane sensor signal transduction histidine kinase. (485 aa)    
Predicted Functional Partners:
AMN40622.1
LuxR family transcriptional regulator.
 
 
 0.973
AMN41376.1
Two component LuxR family transcriptional regulator.
 
 0.883
AMN44766.1
Transcriptional regulator, LuxR family.
 
 
 0.792
AMN45326.1
Two-component hybrid sensor and regulator.
  
 
 0.667
AMN40621.1
TonB-dependent receptor.
 
     0.665
AMN38585.1
Phage shock protein A, PspA.
  
  
 0.649
AMN39151.1
Aminoglycoside phosphotransferase.
   
  
 0.644
AMN38630.1
LuxR family sensory box transcriptional regulator.
 
 
 0.636
AMN40624.1
Pentapeptide repeat protein.
  
    0.632
AMN45492.1
Multi-sensor hybrid histidine kinase.
  
 
 0.616
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.