STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40676.1Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein. (332 aa)    
Predicted Functional Partners:
AMN40675.1
ABC transporter permease.
 
    0.904
AMN40672.1
ABC transporter permease/ATPase.
 
    0.885
AMN40673.1
FAD linked oxidase domain-containing protein.
 
     0.846
AMN44479.1
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
    0.823
AMN44480.1
ABC transporter ATP-binding protein.
 
    0.810
AMN41125.1
ABC transporter permease.
 
    0.781
AMN43836.1
ABC transporter substrate-binding protein.
  
     0.767
AMN40674.1
Rieske (2Fe-2S) iron-sulfur domain protein.
 
     0.753
AMN40678.1
Cytosine deaminase.
 
     0.732
AMN41102.1
ABC transporter substrate-binding protein.
  
     0.718
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.