STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40696.1General secretion pathway protein L GspL. (320 aa)    
Predicted Functional Partners:
AMN40702.1
General secretion pathway protein F GspF.
 
 
 
 0.908
AMN40697.1
General secretory pathway protein K GspK.
 
  
 0.907
AMN40703.1
General secretion pathway protein E GspE.
 
 
 0.907
AMN40705.1
General secretion pathway protein D GspD.
 
  
 0.885
AMN40701.1
General secretion pathway protein G GspG.
 
  
 0.861
AMN40695.1
General secretion pathway protein M GspM.
     
 0.815
AMN40694.1
Hypothetical protein.
     
 0.806
AMN40698.1
General secretion pathway protein J GspJ.
  
  
 0.616
AMN40699.1
Hypothetical protein.
  
  
 0.616
AMN40700.1
General secretion pathway protein H GspH.
  
  
 0.616
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.