STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40712.1MarR family transcriptional regulator. (204 aa)    
Predicted Functional Partners:
AMN40710.1
4-hydroxyphenylacetate-3-hydroxylase.
 
   
 0.857
AMN43846.1
Cupin 2 domain-containing protein.
 
    0.782
AMN40709.1
Amidohydrolase.
 
    0.661
AMN43154.1
GCN5-related N-acetyltransferase.
  
   
 0.657
AMN40711.1
Peptide synthase.
 
     0.649
AMN44637.1
4-hydroxyphenylacetate 3-hydroxylase.
 
   
 0.633
AMN40070.1
4-hydroxyphenylacetate 3-hydroxylase.
 
   
 0.626
AMN39379.1
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein.
  
     0.623
AMN43843.1
4-hydroxyphenylacetate 3-hydroxylase.
  
   
 0.588
AMN43592.1
4-hydroxyphenylacetate 3-hydroxylase.
 
   
 0.587
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.