STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40825.1Hypothetical protein. (258 aa)    
Predicted Functional Partners:
AMN40824.1
Amine oxidase.
  
 0.996
AMN40826.1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.995
AMN42932.1
Methyltransferase, cyclopropane fatty acid synthase.
  
 0.946
AMN40820.1
Hypothetical protein.
     0.937
AMN40822.1
anti-ECFsigma factor, ChrR.
 
  
 0.915
AMN40823.1
ECF subfamily RNA polymerase sigma-24 factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.815
AMN40819.1
Putative membrane protein.
 
     0.669
AMN40821.1
Esterase/lipase.
 
     0.656
AMN41802.1
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
    0.535
AMN40173.1
beta-Ig-H3/fasciclin.
  
    0.409
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.