STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40828.1Extra-cytoplasmic solute receptor. (328 aa)    
Predicted Functional Partners:
AMN40827.1
Extra-cytoplasmic solute receptor.
 
    
0.585
AMN44652.1
Tripartite tricarboxylate transporter TctA family protein.
  
    0.539
AMN39491.1
Tripartite tricarboxylate transporter(TTT) family protein TctA.
  
    0.535
AMN42049.1
Tripartite tricarboxylate transporter TctA family.
  
    0.506
AMN44913.1
TTT family tricarboxylate transporter TctA.
  
    0.505
AMN44167.1
Tripartite tricarboxylate transporter TctA family.
  
    0.504
AMN43803.1
TTT family tricarboxylate transporter TctA.
  
    0.502
AMN38588.1
TTT family tricarboxylate transporter.
  
    0.493
AMN39765.1
Tricarboxylate transport membrane protein.
  
    0.469
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.