STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40876.1Oxidoreductase domain-containing protein. (341 aa)    
Predicted Functional Partners:
AMN40875.1
Xylose isomerase-like enzyme.
  
  
 0.852
AMN39540.1
Oxidoreductase domain-containing protein.
  
     0.770
AMN43404.1
Oxidoreductase.
  
     0.770
AMN39582.1
Oxidoreductase domain-containing protein.
  
     0.756
AMN43424.1
Oxidoreductase-like protein.
  
     0.754
AMN40877.1
DoxX family protein.
       0.697
AMN43210.1
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.637
AMN43423.1
DegT/DnrJ/EryC1/StrS family aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.622
AMN39518.1
Sugar phosphate isomerase/epimerase.
 
  
 0.600
AMN43453.1
Spore coat polysaccharide biosynthesis protein spsC; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.599
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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