STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40990.1Extra-cytoplasmic solute receptor. (335 aa)    
Predicted Functional Partners:
AMN40991.1
TTT family tricarboxylate transporter, receptor protein.
 
    
0.736
AMN44912.1
Tripartite tricarboxylate transporter TctB.
 
    0.618
AMN44167.1
Tripartite tricarboxylate transporter TctA family.
    0.603
AMN38588.1
TTT family tricarboxylate transporter.
    0.597
AMN44913.1
TTT family tricarboxylate transporter TctA.
    0.588
AMN43802.1
Tripartite tricarboxylate transporter TctB family.
 
    0.585
AMN42049.1
Tripartite tricarboxylate transporter TctA family.
 
    0.578
AMN43803.1
TTT family tricarboxylate transporter TctA.
 
    0.578
AMN40992.1
acyl-CoA transferase; Belongs to the CoA-transferase III family.
  
    0.568
AMN40993.1
hydroxymethylglutaryl-CoA lyase.
       0.565
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.