STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN41142.1Type I secretion target repeat protein. (7450 aa)    
Predicted Functional Partners:
AMN41144.1
Peptidase, M50 family.
 
   
 0.861
AMN41143.1
TonB-dependent siderophore receptor.
 
   
 0.859
AMN41141.1
Hypothetical protein.
      
0.773
AMN39762.1
Type I secretion system ABC transporter, PrtD family.
 
 
 0.709
AMN40736.1
HlyB family ABC transporter ATP-binding protein.
 
 
 0.695
AMN40735.1
HlyD family secretion protein.
 
  
 0.690
AMN41146.1
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.685
AMN43726.1
Type I secretion membrane fusion protein, HlyD family.
 
  
 0.679
AMN43727.1
Type I secretion system ABC transporter, PrtD family.
 
 
 0.670
AMN44275.1
Type I secretion membrane fusion protein, HlyD family.
 
  
 0.643
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.