STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN41280.1Hydrogenase 4 subunit E. (223 aa)    
Predicted Functional Partners:
AMN41282.1
Hydrogenase 4 subunit G.
 
  
 0.997
AMN41283.1
Hydrogenase 4 subunit I.
 
  
 0.985
AMN41279.1
Hydrogenase 4 subunit C.
 
  
 0.981
AMN41278.1
Hydrogenase 4 subunit B.
 
  
 0.975
AMN41281.1
Hydrogenase 4 subunit F.
 
  
 0.974
AMN44120.1
Monovalent cation/H+ antiporter subunit D.
  
  
 0.508
AMN39615.1
ABC transporter ATP binding protein/permease.
  
     0.445
AMN39783.1
NADH-ubiquinone oxidoreductase chain F.
      
 0.408
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.