STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN41289.1Peptidase C14 caspase catalytic subunit p20. (328 aa)    
Predicted Functional Partners:
AMN44902.1
TPR repeat-containing protein.
 
   
 0.783
AMN39486.1
TPR repeat-containing protein.
   
 0.779
AMN42421.1
TPR repeat-containing protein.
   
 0.778
AMN44951.1
Type 11 methyltransferase.
 
   
 0.772
AMN43314.1
O-linked N-acetylglucosamine transferase, SPINDLY family.
 
     0.770
AMN39701.1
TPR repeat-containing protein.
   
 0.746
AMN43366.1
TPR repeat-containing protein.
 
   
 0.710
AMN39735.1
TPR repeat-containing protein.
 
   
 0.656
AMN40959.1
Tetratricopeptide repeat protein.
 
   
 0.517
AMN41290.1
Ketosteroid isomerase-like enzyme.
       0.491
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.