STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN41293.1Hypothetical protein. (149 aa)    
Predicted Functional Partners:
AMN41292.1
Extra-cytoplasmic solute receptor protein.
       0.762
AMN42053.1
Gluconolactonase.
 
     0.680
AMN41291.1
Amidohydrolase.
  
    0.613
AMN42431.1
Hypothetical protein.
  
     0.585
AMN41294.1
Beta-lactamase-like protein.
       0.576
AMN45475.1
LVIVD repeat-containing protein.
  
     0.551
AMN39438.1
Heterodisulfide reductase, subunit D.
  
     0.532
AMN42052.1
Glucose/sorbosone dehydrogenase.
 
     0.526
AMN40179.1
Outer membrane protein.
  
     0.510
AMN45290.1
Lipoprotein LppY.
  
     0.476
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.