STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN41458.1Short-chain dehydrogenase. (266 aa)    
Predicted Functional Partners:
AMN41457.1
Extracytoplasmic binding receptor.
       0.682
AMN43003.1
2-polyprenylphenol hydroxylase-like oxidoreductase.
 
 0.534
AMN45404.1
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.529
AMN38869.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.499
AMN42238.1
Short-chain oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.476
AMN45377.1
3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase.
 
 0.476
AMN39127.1
Amino acid adenylation enzyme/thioester reductase family protein.
 
 
 0.469
AMN42888.1
Oxidoreductase, short-chain dehydrogenase/reductase family.
 
  
 0.456
AMN40628.1
Carboxymuconolactone decarboxylase family protein.
  
     0.450
AMN42924.1
Malonyl CoA-ACP transacylase.
 
 
 0.445
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.