STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN41580.1Hypothetical protein. (174 aa)    
Predicted Functional Partners:
AMN41582.1
Hypothetical protein.
  
    0.813
AMN41581.1
Hypothetical protein.
       0.806
AMN41565.1
uroporphyrinogen-III C-methyltransferase.
  
  
 0.663
AMN43791.1
uroporphyrin-III C-methyltransferase.
  
  
 0.663
AMN38608.1
NAD(P)H-nitrite reductase.
  
 
 0.585
AMN40253.1
Nitrite reductase (NAD(P)H), large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.585
AMN41659.1
Pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.585
AMN41528.1
Nitrate reductase subunit beta NarH.
  
  
 0.506
AMN39391.1
Flavocytochrome C flavoprotein subunit.
  
 
 0.441
AMN40168.1
Glutamate synthase large subunit.
  
  
 0.424
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.