STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN41641.1Putrescine ABC transporter putrescine-binding protein PotF; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (369 aa)    
Predicted Functional Partners:
AMN44567.1
Spermidine/putrescine transport system permease protein PotC.
 
 0.997
AMN44006.1
Spermidine/putrescine ABC transporter permease.
  
 0.989
AMN44568.1
Putrescine transport system permease protein PotH.
 
 0.981
potA-3
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.972
AMN41172.1
ABC-type spermidine/putrescine transporter, permease II.
  
 0.971
AMN40499.1
Spermidine/putrescine ABC transporter permease II.
  
 0.909
AMN44007.1
Spermidine/putrescine ABC transporter permease.
  
 0.905
AMN40500.1
Spermidine/putrescine ABC transporter permease I.
  
 0.898
AMN41171.1
ABC-type spermidine/putrescine transporter, permease I.
  
 0.898
potA-2
Putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
 0.853
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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