STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN41644.1Extra-cytoplasmic solute receptor protein. (325 aa)    
Predicted Functional Partners:
AMN41643.1
Monooxygenase.
       0.773
AMN41642.1
L-asparaginase II.
       0.532
AMN44912.1
Tripartite tricarboxylate transporter TctB.
 
    0.462
AMN44167.1
Tripartite tricarboxylate transporter TctA family.
 
    0.433
AMN42048.1
Tripartite tricarboxylate transporter TctB family.
 
    0.426
AMN38588.1
TTT family tricarboxylate transporter.
 
    0.423
AMN44913.1
TTT family tricarboxylate transporter TctA.
 
    0.418
AMN43803.1
TTT family tricarboxylate transporter TctA.
 
    0.417
AMN42049.1
Tripartite tricarboxylate transporter TctA family.
 
    0.412
AMN38589.1
Tripartite tricarboxylate transporter TctB family.
 
    0.408
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.