STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN41698.1Carbon monoxide dehydrogenase F protein. (228 aa)    
Predicted Functional Partners:
AMN41697.1
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
     0.990
AMN41699.1
4-diphosphocytidyl-2C-methyl-D-erythritol synthase.
  
 0.981
AMN41696.1
Carbon monoxide dehydrogenase E protein.
 
     0.792
AMN41694.1
Carbon monoxide dehydrogenase medium subunit, coxM-like protein.
 
  
 0.723
AMN41693.1
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein.
 
  
 0.699
AMN41695.1
Carbon monoxide dehydrogenase D protein.
 
     0.640
AMN39575.1
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein.
 
  
 0.591
AMN41700.1
Signal peptide protein.
       0.584
AMN39861.1
Carbon monoxide dehydrogenase.
 
  
 0.566
AMN43963.1
Carbon-monoxide dehydrogenase large subunit.
 
  
 0.554
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.