STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN41790.1Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. (338 aa)    
Predicted Functional Partners:
AMN41792.1
Glutamate Aspartate transport system permease protein GltK.
 
 0.995
AMN41791.1
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 
 
 0.994
AMN41793.1
Glutamate/glutamine/aspartate/asparagine transport ATP-binding protein bztD.
 
 0.987
AMN40079.1
Extracellular solute-binding protein; Belongs to the bacterial solute-binding protein 3 family.
  
  
 
0.903
AMN41789.1
Cystathionine beta-lyase.
  
  
 0.578
AMN41788.1
Amidase.
       0.511
AMN44437.1
Cyclohexadienyl dehydratase.
  
     0.489
AMN44849.1
ABC transporter periplasmic amino acid-binding protein.
  
     0.474
AMN40168.1
Glutamate synthase large subunit.
  
  
 0.432
AMN45185.1
ABC transporter ATP-binding protein.
  
 
 0.421
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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