STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN41966.1Sortase family protein. (197 aa)    
Predicted Functional Partners:
AMN41967.1
Marine proteobacterial sortase target protein.
 
   
 0.912
AMN41416.1
40-residue YVTN family beta-propeller repeat protein.
 
     0.520
AMN43039.1
Integral membrane protein.
  
     0.507
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
  
   
 0.505
AMN41046.1
Phytanoyl-CoA dioxygenase.
  
     0.458
AMN41968.1
XRE family transcriptional regulator.
       0.437
AMN41073.1
Metal ion dependent adhesion motif-containing protein.
  
  
 0.430
AMN44560.1
Von Willebrand factor type A domain protein.
  
  
 0.430
AMN45071.1
Von Willebrand factor type A domain protein.
  
  
 0.430
AMN39241.1
Nuclease (SNase-like).
 
  
 0.422
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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