STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN42001.1Extra-cytoplasmic solute receptor. (320 aa)    
Predicted Functional Partners:
AMN42000.1
Luciferase-like protein.
       0.752
AMN44912.1
Tripartite tricarboxylate transporter TctB.
  
    0.496
AMN43802.1
Tripartite tricarboxylate transporter TctB family.
  
    0.447
AMN42002.1
Hypothetical protein.
       0.438
AMN38589.1
Tripartite tricarboxylate transporter TctB family.
  
    0.435
AMN42003.1
Thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family.
       0.433
AMN41998.1
LuxR family transcriptional regulator.
       0.401
AMN41999.1
PAS/PAC sensor Signal transduction histidine kinase.
       0.401
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.