Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMN42039.1DoxX family protein. (158 aa)    
Predicted Functional Partners:
AMN42040.1
Translation elongation factor G.
   
   0.550
AMN38484.1
Magnesium-translocating P-type ATPase.
   
  0.429
AMN38511.1
Cation-transporting ATPase.
   
  0.429
AMN45030.1
Hypothetical protein; Belongs to the UPF0276 family.
  
  
 0.425
AMN45031.1
Hypothetical protein.
  
  
 0.416
AMN42041.1
Hypothetical protein.
       0.410
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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