Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMN42093.1Methyltransferase. (200 aa)    
Predicted Functional Partners:
AMN39127.1
Amino acid adenylation enzyme/thioester reductase family protein.
    
 0.801
AMN42094.1
Purine phosphorylase family 1.
       0.773
AMN40743.1
Non-ribosomal peptide synthetase.
    
 0.702
AMN43176.1
Non-ribosomal peptide synthase.
    
 0.651
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
       0.631
AMN42095.1
Hypothetical protein.
       0.476
AMN42091.1
Mannose-6-phosphate isomerase.
       0.451
AMN43471.1
3-demethylubiquinone-9 3-methyltransferase.
 
 0.435
AMN42090.1
Hypothetical protein.
       0.415
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.409
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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