STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN42160.1MarR family transcriptional regulator. (170 aa)    
Predicted Functional Partners:
fliP
Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
   
    0.787
AMN38634.1
HemY domain-containing protein.
  
     0.670
flgH
Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
    0.668
AMN42441.1
DNA protecting protein DprA.
  
    0.639
AMN39195.1
Phosphoribosyltransferase.
  
    0.623
AMN38889.1
Invasion associated locus B family protein.
  
     0.619
AMN44748.1
Hypothetical protein.
  
     0.612
AMN44865.1
2'-deoxycytidine 5'-triphosphate deaminase.
  
     0.575
AMN38824.1
Gmp synthase - glutamine amidotransferase domain protein.
  
     0.553
AMN42119.1
Hypothetical protein.
  
     0.547
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.