STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN42163.1TTT family tricarboxylate transporter, receptor protein. (326 aa)    
Predicted Functional Partners:
AMN42164.1
TIM-barrel fold metal-dependent hydrolase.
       0.773
AMN40341.1
Extra-cytoplasmic solute receptor family protein.
  
     0.631
AMN40582.1
Hypothetical protein.
  
     0.547
AMN42162.1
Alkanal monooxygenase.
       0.533
AMN44912.1
Tripartite tricarboxylate transporter TctB.
  
    0.528
AMN43802.1
Tripartite tricarboxylate transporter TctB family.
  
    0.498
AMN38589.1
Tripartite tricarboxylate transporter TctB family.
  
    0.473
AMN39490.1
Tripartite tricarboxylate transporter(TTT) family protein TctB.
  
    0.444
AMN42048.1
Tripartite tricarboxylate transporter TctB family.
  
    0.435
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.