STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN42209.1RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (409 aa)    
Predicted Functional Partners:
AMN42210.1
AcrB/AcrD/AcrF family protein.
 
 0.937
macB
Macrolide export ATP-binding/permease macB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.877
AMN43397.1
HAE1 family RND efflux transporter translocase subunit.
 
 0.843
AMN45329.1
HAE1 family RND efflux transporter translocase subunit.
 
 0.843
AMN38962.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
 0.842
AMN45258.1
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter.
 
 0.838
AMN40197.1
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter.
 
 0.837
AMN39373.1
RND efflux system, outer membrane lipoprotein, NodT.
 
 0.812
AMN42208.1
TetR family transcriptional regulator.
 
   
 0.614
AMN44788.1
Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.538
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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