STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN42249.1Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (585 aa)    
Predicted Functional Partners:
AMN42248.1
Dipeptide/oligopeptide/nickel ABC transporter, permease protein.
  
 0.996
AMN44027.1
Peptide ABC transporter permease protein.
  
 0.982
AMN40553.1
Dipeptide/oligopeptide/nickel ABC transporter permease.
  
 0.981
AMN41514.1
Oligopeptide permease OppC.
  
 0.981
AMN42673.1
Dipeptide transport system permease protein DppC.
  
 0.974
AMN44038.1
Oligopeptide ABC transporter permease.
  
 0.972
AMN42247.1
Dipeptide transport system permease protein DppB.
  
 0.963
AMN44039.1
Oligopeptide ABC transporter permease.
  
 0.839
AMN44028.1
Peptide ABC transporter permease protein.
  
 0.834
AMN40552.1
ABC transporter permease.
  
 0.831
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.