STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN42324.1methylmalonyl-CoA epimerase. (134 aa)    
Predicted Functional Partners:
AMN41329.1
methylmalonyl-CoA mutase, large subunit.
 
  
 0.981
AMN39639.1
methylmalonyl-CoA mutase.
 
  
 0.979
AMN41330.1
methylmalonyl-CoA mutase, small subunit.
 
  
 0.979
AMN42558.1
propionyl-CoA carboxylase subunit beta.
 
 
 0.978
AMN42535.1
acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.914
AMN39640.1
crotonyl-CoA reductase.
    
 0.907
AMN41327.1
Arginine/ornithine transport system ATPase.
 
  
 0.818
AMN42325.1
Hypothetical protein.
       0.806
AMN42322.1
biotin--acetyl-CoA-carboxylase ligase.
  
    0.686
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.676
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.