STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN42459.1Diguanylate cyclase (GGDEF) domain-containing protein. (457 aa)    
Predicted Functional Partners:
AMN41352.1
Two-component sensor histidine kinase.
 0.993
AMN41539.1
Sensor signal transduction histidine kinase.
 0.989
AMN41450.1
Two-component sensor histidine kinase PleC.
 0.973
AMN42669.1
Multi-sensor hybrid histidine kinase.
 
 0.937
AMN45492.1
Multi-sensor hybrid histidine kinase.
 
 
0.932
AMN45326.1
Two-component hybrid sensor and regulator.
  
 
0.928
AMN44762.1
Sensor histidine kinase.
 
0.923
AMN38633.1
PAS domain S-box protein.
 
 
 0.922
AMN44333.1
Signal transduction histidine kinase CheA.
  
 
 0.916
AMN43350.1
Response regulator receiver modulated diguanylate cyclase.
  
  
 
0.911
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.