STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN42471.1Branched-chain amino acid transport protein AzlD. (115 aa)    
Predicted Functional Partners:
AMN42472.1
Branched-chain amino acid permease.
 
     0.956
AMN41609.1
Hypothetical protein.
  
     0.730
AMN44175.1
Alpha-isopropylmalate/homocitrate synthase AsmA.
  
     0.717
AMN42374.1
Glyoxalase.
  
     0.702
AMN45003.1
Cytochrome c oxidase, cbb3-type, CcoQ subunit, FixQ.
  
     0.691
AMN44556.1
Phasin.
 
     0.655
AMN43361.1
Negative regulator of septation ring formation.
  
     0.653
AMN44761.1
Two-component hybrid sensor histidine kinase and response regulator.
  
     0.647
AMN39940.1
Hypothetical protein.
  
     0.630
AMN38697.1
Hypothetical protein.
  
     0.619
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.