STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN42732.1Transglutaminase family protein. (224 aa)    
Predicted Functional Partners:
AMN40211.1
Signal peptide protein.
  
     0.769
AMN42743.1
Hypothetical protein.
  
     0.763
AMN44775.1
Hypothetical protein.
  
     0.755
AMN42720.1
FHA domain-containing protein.
  
     0.740
AMN44947.1
CheA signal transduction histidine kinase.
  
     0.738
AMN42738.1
Hypothetical protein.
  
     0.737
AMN44138.1
NUDIX hydrolase.
  
     0.736
AMN44316.1
Flagellar export protein FliJ.
  
     0.734
AMN43361.1
Negative regulator of septation ring formation.
  
     0.732
AMN44841.1
Hypothetical protein.
  
     0.726
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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