STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN42786.1RNA-binding region RNP-1 protein. (1230 aa)    
Predicted Functional Partners:
AMN44563.1
AsmA family protein.
 
   
 0.774
AMN44337.1
Hypothetical protein.
 
    0.771
AMN41358.1
N-transmembrane anchored protein.
  
     0.768
AMN45155.1
Hypothetical protein.
  
     0.768
AMN41609.1
Hypothetical protein.
  
     0.764
AMN38936.1
Transcriptional activator ligand binding domain protein.
  
     0.760
AMN39671.1
Hypothetical protein.
  
     0.758
AMN45074.1
Peptidoglycan binding domain-containing protein.
  
     0.756
AMN40282.1
N-acetyltransferase.
  
     0.745
AMN43361.1
Negative regulator of septation ring formation.
  
     0.743
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.