STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN42899.1Cytochrome c553. (320 aa)    
Predicted Functional Partners:
AMN39168.1
Cytochrome c, class I.
 
     0.753
AMN44241.1
Cytochrome c.
 
     0.749
AMN43781.1
Cytochrome c.
  
     0.711
AMN44466.1
Cytochrome c553.
  
     0.703
AMN45004.1
Cytochrome c oxidase, cbb3-type, subunit II, FixO.
  
 
 0.614
AMN42898.1
Dimethyl sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.573
AMN42901.1
Cytochrome c, class I.
  
  
 0.572
AMN45005.1
Cytochrome c oxidase, cbb3-type, subunit I, FixN; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.568
AMN39391.1
Flavocytochrome C flavoprotein subunit.
   
 
 0.567
AMN42900.1
Sulfite oxidase SoxC.
     
 0.534
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.