STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN43039.1Integral membrane protein. (162 aa)    
Predicted Functional Partners:
AMN43736.1
Exostosin family protein.
  
     0.681
AMN38585.1
Phage shock protein A, PspA.
  
     0.665
AMN40922.1
Cupin.
  
     0.654
AMN42370.1
Signal transduction histidine kinase.
  
     0.653
AMN42299.1
LuxR family transcriptional regulator.
  
     0.614
AMN41967.1
Marine proteobacterial sortase target protein.
  
     0.595
AMN41469.1
CadC family transcriptional regulator.
  
     0.553
AMN43885.1
LuxR family transcriptional regulator.
  
     0.551
AMN41416.1
40-residue YVTN family beta-propeller repeat protein.
 
     0.536
AMN42968.1
protein-S-isoprenylcysteine methyltransferase.
  
     0.520
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.