STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN43106.1Anion transporter. (462 aa)    
Predicted Functional Partners:
AMN45495.1
Malic enzyme.
  
  
 0.606
AMN43105.1
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.542
AMN44118.1
Monovalent cation/H+ antiporter subunit A/B.
  
  
 0.535
AMN43107.1
Amidohydrolase 2.
  
    0.517
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
 
 
 0.509
AMN41800.1
Cysteine synthase A.
  
  
 0.487
cysC
Bifunctional sulfate adenylyltransferase/adenylyl-sulfate kinase CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.436
AMN42014.1
Auxin efflux carrier.
  
   0.413
AMN45195.1
Monovalent cation:proton antiporter-2 (CPA2) family transporter.
     
 0.405
AMN43259.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.403
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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