STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN43289.1Tripartite AtP-independent periplasmic transporter subunit DctQ. (191 aa)    
Predicted Functional Partners:
AMN43290.1
TRAP dicarboxylate transporter subunit DctM.
 
     0.904
AMN43288.1
TRAP dicarboxylate transporter subunit DctP.
 
  
 0.896
AMN40514.1
TRAP dicarboxylate transporter subunit DctP.
 
  
 0.811
AMN38739.1
TRAP dicarboxylate transporter subunit DctP.
 
  
 0.784
AMN38562.1
TRAP dicarboxylate transporter subunit DctP.
 
  
 0.761
AMN43573.1
TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.760
AMN45228.1
TRAP dicarboxylate transporter subunit DctP.
 
  
 0.754
AMN40665.1
TRAP dicarboxylate transporter, DctP subunit, putative.
 
  
 0.747
AMN45226.1
TRAP dicarboxylate transporter subunit DctM.
 
 
 0.737
AMN45411.1
TRAP dicarboxylate family transporter subunit DctM.
 
 
 0.735
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.