STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN43362.1Carbohydrate-selective porin. (447 aa)    
Predicted Functional Partners:
AMN41920.1
Outer membrane protein Omp31.
  
     0.773
AMN42154.1
Hypothetical protein.
  
     0.742
AMN42720.1
FHA domain-containing protein.
  
     0.735
AMN42011.1
Invasion associated locus B.
 
     0.728
AMN38838.1
Hypothetical protein.
  
     0.721
AMN42420.1
Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.690
AMN39523.1
Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.672
AMN44841.1
Hypothetical protein.
  
     0.667
AMN42106.1
Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.646
AMN44806.1
Invasion associated locus B family protein.
 
     0.645
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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