STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN43467.1UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (327 aa)    
Predicted Functional Partners:
AMN40777.1
NAD-dependent epimerase/dehydratase.
 
0.912
AMN43616.1
dTDP-glucose 4,6 dehydratase.
  
0.912
AMN43776.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
  
 
0.902
AMN43466.1
Type 11 methyltransferase.
     
 0.778
AMN43465.1
Hypothetical protein.
  
    0.714
AMN39542.1
NAD-dependent epimerase/dehydratase.
 
  
 0.690
AMN43468.1
Carbamoyltransferase.
       0.665
AMN43490.1
D,D-heptose 1,7-bisphosphate phosphatase.
    
 0.633
AMN43472.1
Polysaccharide biosynthesis protein CapD.
     
 0.625
AMN43471.1
3-demethylubiquinone-9 3-methyltransferase.
       0.620
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.