STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN43622.1Capsular exopolysaccharide family protein. (731 aa)    
Predicted Functional Partners:
AMN43760.1
Sugar transferase.
 
  
 0.971
AMN45484.1
Polysaccharide export protein.
 
 
 0.971
AMN42254.1
Undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.965
AMN43765.1
Capsule polysaccharide export outer membrane protein.
 
 
 0.922
AMN43608.1
Colanic acid biosynthsis UDP-glucose lipid carrier transferase WcaJ.
 
  
 0.904
AMN39827.1
Hypothetical protein.
  
 
 0.902
AMN42103.1
Hypothetical protein.
  
 
 0.902
AMN43759.1
Hypothetical protein.
  
 
 0.902
AMN39783.1
NADH-ubiquinone oxidoreductase chain F.
    
 0.794
AMN43472.1
Polysaccharide biosynthesis protein CapD.
 
  
 0.785
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.