STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN43711.1PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein. (802 aa)    
Predicted Functional Partners:
AMN42287.1
Chemotaxis protein methyltransferase CheR.
 
  
 0.855
AMN41403.1
Signal transduction histidine kinase.
 
  
 0.817
AMN44333.1
Signal transduction histidine kinase CheA.
  
  
 0.816
AMN43149.1
Signal transduction histidine kinase.
    
 0.793
AMN45347.1
Diguanylate cyclase.
 
 
0.776
AMN39637.1
Two-component hybrid sensor and regulator.
 
  
 0.769
AMN45492.1
Multi-sensor hybrid histidine kinase.
 
 
 0.769
AMN43873.1
Diguanylate cyclase/phosphodiesterase.
 
 
0.761
AMN44765.1
Response regulator receiver modulated diguanylate phosphodiesterase.
 
  
0.752
AMN38736.1
Two-component hybrid sensor and regulator.
 
  
 0.748
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.