STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN43727.1Type I secretion system ABC transporter, PrtD family. (571 aa)    
Predicted Functional Partners:
AMN43726.1
Type I secretion membrane fusion protein, HlyD family.
  
 0.955
pstB
Phosphate transport ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.897
AMN41793.1
Glutamate/glutamine/aspartate/asparagine transport ATP-binding protein bztD.
 
     
0.868
AMN40735.1
HlyD family secretion protein.
  
 0.821
AMN39761.1
HlyD family secretion protein.
   
 0.800
AMN44275.1
Type I secretion membrane fusion protein, HlyD family.
  
 0.775
AMN43777.1
Beta-glucanase/beta-glucan synthetase.
 
 
 0.722
AMN43158.1
Outer membrane autotransporter.
 
 
 0.698
AMN41142.1
Type I secretion target repeat protein.
 
 
 0.670
AMN39141.1
Putative calcium-binding protein.
 
 
 0.593
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.