STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN43749.1Teichoic-acid-transporting ATPase. (419 aa)    
Predicted Functional Partners:
AMN43750.1
O-antigen export system permease.
 
 0.999
AMN41333.1
Glycosyl transferase, group 2 family protein.
 
  
 0.835
AMN43752.1
Glycosyl transferase, group 1.
 
 
 0.802
AMN43765.1
Capsule polysaccharide export outer membrane protein.
  
  
 0.802
AMN45484.1
Polysaccharide export protein.
  
  
 0.786
AMN43748.1
Methyltransferase, FkbM family.
 
     0.778
AMN43751.1
Hypothetical protein.
       0.773
AMN43759.1
Hypothetical protein.
 
  
 0.741
AMN39827.1
Hypothetical protein.
  
  
 0.691
AMN42103.1
Hypothetical protein.
  
  
 0.691
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.