STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN43951.1Isochorismatase hydrolase. (234 aa)    
Predicted Functional Partners:
AMN42220.1
Isochorismatase hydrolase.
  
   
 0.777
AMN43952.1
Polysaccharide deacetylase family protein.
       0.774
AMN42057.1
Isochorismatase family protein.
  
     0.773
AMN43953.1
ABC transporter substrate-binding protein.
       0.773
AMN42412.1
Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB.
  
     0.771
AMN43097.1
Isochorismatase hydrolase.
  
     0.770
AMN44013.1
Asp/Glu racemase.
 
  
 0.768
AMN40758.1
Isochorismatase transposase.
  
     0.764
AMN43919.1
Asp/Glu/Hydantoin racemase.
 
  
 0.762
AMN41117.1
Arylmalonate decarboxylase.
 
  
 0.761
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.