STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN44265.1N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD. (280 aa)    
Predicted Functional Partners:
AMN41866.1
Beta N-acetyl-glucosaminidase.
 
  
 0.806
murD
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
   
 0.532
AMN45084.1
Major Facilitator Superfamily transporter.
 
   
 0.509
AMN41743.1
Lytic murein transglycosylase.
     
 0.445
AMN44264.1
PRC-barrel domain-containing protein.
       0.437
AMN38813.1
Nucleotidyl transferase.
  
     0.434
AMN45120.1
Cell wall-associated hydrolase, invasion-associated protein.
  
  
 0.400
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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