STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN44404.1Mucoidy inhibitor A. (549 aa)    
Predicted Functional Partners:
AMN44147.1
Sulfatase.
 
     0.620
AMN42024.1
Abortive infection protein.
 
     0.613
AMN44148.1
Sulfatase.
 
     0.588
AMN43039.1
Integral membrane protein.
  
     0.507
AMN42299.1
LuxR family transcriptional regulator.
  
     0.488
AMN44976.1
Hypothetical protein.
  
     0.475
AMN44405.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.471
AMN43921.1
Major facilitator superfamily protein.
  
     0.462
AMN38585.1
Phage shock protein A, PspA.
 
     0.454
AMN44406.1
SseB family protein.
       0.432
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.